rs33441125 SNP Detail

Summary

• ID
  rs33441125
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:9166351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGACTAGT CCCATCCCCT
  TTTCTGCAAA TGTTATGATT TTATTCTTTT TGTATAATTT AGTGGTTGTG TAGTAATCTG
  AGAGTTTTAA TCTTCATTTC CTGATGACTA ACCAATTCGA TTTTATTTTC ACATTTTTAG
  TTGCCAGTGG GTTGGCGCCC TCTCTCTCTC TGTGTGTACC TTTAGTCTTT TTTGCGTTTT
  W
  AAATTTGGAT TATATAGCCT GAGAATTATT ATAATGATTT GATGCTTTTA GAGAAGGCCC
  AAATTTGGGT TCCAGCACCC ATATAGCAAT TCTCAACCAC TTGTAATTCC AGGTTAAGGG
  GATTAAGTGC CCTCTTCTGA ACTCTGCAGG CACCAGGCCT TTACACATAC ACATAAAAAA
  TAAATAAATA AAGACAAAGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46814167	NES10971730	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33441125					SNP	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46814167	NES10971730	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:9166351 () rs orientation: forward

Symbol	Name	Function Class
DXMit136	DNA segment, Chr X, Massachusetts Institute of Technology 136	308 bp proximal
Rr689856	regulatory region 689856	1137 bp distal
Xk	X-linked Kx blood group	within coordinates