rs33448403 SNP Detail

Summary

• ID
  rs33448403
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:110977773 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAAGCT AAAGTCAAGG
  TCTTTTGTAG CCAACCCTGA GAATATTAAA TATTAAAAAA GATCAATAAT TAAGAGGGTT
  GGGGAGATGG CTTGGTGTAA TGTGCTTGCC ACTTAAGCAT GAGAGTGCTT GCTGTACATG
  AAAGCACACT TGGGAACCAG AGGCAGGTGG AGCTCTTAGT TCAAGGCCTG TCTGGTCTAC
  R
  AAGTGAGTTC CAGGACAGCC AGGGCTACAC AGAGAAACCC TGTCTTTTTA AAATCCAACC
  AACCAAACAA AAAAAAAAAT AAACCAGTAT ATAGAAAATC TAGAGAACCC ACCAATAAGT
  TTGCTTAGAG GATATAAGTT ATACGGAAGC AAACTTTAGC TGGTCTCCTA TACCAGACCA
  CAGTTAAGGT GGTAGCTCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45779959	mCV22306977	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss149056765	ENSMUSSNP1110912	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33448403					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:110977773 () rs orientation: forward

Symbol	Name	Function Class
Hscb	HscB iron-sulfur cluster co-chaperone	within coordinates
Rr616964	regulatory region 616964	1719 bp distal