rs33448889 SNP Detail

Summary

• ID
  rs33448889
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46433308 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT TGTCATTGCT GTTTTGTCTG
  R
  TTTGAAGCAA GATTCTTACT GTATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39537191	mCV23741835	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss145697183	ENSMUSSNP4275007	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33448889					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46433308 () rs orientation: forward

Symbol	Name	Function Class
Mrps18a	mitochondrial ribosomal protein S18A	within coordinates
Rr341804	regulatory region 341804	1493 bp proximal
Rsph9	radial spoke head 9 homolog (Chlamydomonas)	within coordinates
Tssr5133	transcription start site region 5133	1845 bp upstream
Tssr144815	transcription start site region 144815	367 bp upstream
Tssr144816	transcription start site region 144816	1881 bp upstream
Tssr144817	transcription start site region 144817	1905 bp upstream