rs33449231 SNP Detail

Summary

• ID
  rs33449231
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:108090755 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTATTATT AAGAAACCAG TGTAGCTTCT GTTTCATTTG
  TACATTTTAC TGATCAATCT AGAAAGTAAT ATATATGTAT ATATATATGT ATATGTGTAT
  R
  TTTATATATT TTCAAACTTG TGCTATAAAA TACAATTAAT GTTGTTATAT ATATATATAA
  ATATAATAAT TGTATTTTAT AGCACAAGTT TGAAAATAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45279840	mCV24918511	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss147197120	ENSMUSSNP541998	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320453213	CHEV_2_108100567	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33449231					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:108090755 () rs orientation: forward

Symbol	Name	Function Class
D2Mit58	DNA segment, Chr 2, Massachusetts Institute of Technology 58	651 bp distal
Gm13912	predicted gene 13912	within coordinates