rs33449248 SNP Detail

Summary

• ID
  rs33449248
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:4331140 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGGGTGA AAATTTAAGA
  AACACACCTT GCCCTGTGTG TTTTGACCTT TCCTGTTTAA CAGATTAAGT TGAGAAATAT
  TTAGTTCTGG TACAAACTCA TAGACTATTA TAAACTTGGG CACCAAGAAC ACCTTTATGG
  AAATTAGGTA GATTCCCTTC ATTTGTTCAT CAACTCATTC CATAAATGTG TACTGAATGC
  Y
  TACAGTTTGT GTCAGGGAAG AAGGGCTTTG GCCATCATGG TGATTATTAT TATTATTATT
  ATTATTATTA TTATTAGTCA GACCACAATT AAATAAATAG TAATGTAATT TTAATATAAA
  AGTATGCTGA ATATAATGAA AACTCTAAAG GGCTTGACAC TATAACAGCA AGCTGCAAGA
  GAGTCTATGC AAAGGCTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39536910	mCV23062062	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33449248					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:4331140 () rs orientation: forward

Symbol	Name	Function Class
D17Brg125	DNA segment, Chr 17, David E. Bergstrom 125	379 bp proximal
Tssr146295	transcription start site region 146295	738 bp downstream