rs33449859 SNP Detail

Summary

• ID
  rs33449859
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92480932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AATTGTGTAG ATCTGTTTAA ATAGGTTAAC AGTGTGAGTC TGTAGTAAAG CCATGCGCTT
  CCTTTTGCCT TTCAGAGGGG AAGTTTCTCC CAAATTGAAA CTCGTGTGCT CGTTTTAATT
  TCTCAGTGTC TGGACTCTCC TCTTGGCACC AGTGTCTCCT AAAAGTGAAG GGTCGTGACT
  GAAAACCAGC GCATTTCTTG AAAGTCCGCT GTGAGTTAAC ATTCTGAACT GTCTTTTTCC
  CTCGGTCAGG GATTTATTCC TTTCTTTAAG CAAAAAAGTT AAAAAAAAAA AAAAAAAAAA
  R
  AACCTTTTCA CTGTTTATCT CAGGCCACCA AGGAAAAGGA ACAGATTCCT CCTGCATTAA
  TTTTATTATC TTGGCTTCTT AGTTTGTGTC TAATAAAAGC CCCGGGGCTG GTTAGATTAG
  TAAATAGATA GTTCTGAGAG ATAACATCTG GACATCTTTT CAAGGACAGA TGTAATCCAG
  TATTGGCGAC ATCACTGTTG TTTTGTCCTA TGACTTTTGG CAAGCCAGTC TGATGGCATG
  CAGTAATAAT AATAATAATA ATAATAATAA TAATAATAAT AATAATAATA ATAAAAATAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45780331	mCV23365524	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33449859					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92480932 () rs orientation: forward

Symbol	Name	Function Class
Art3	ADP-ribosyltransferase 3	within coordinates
Rr125466	regulatory region 125466	131 bp distal
Tssr47295	transcription start site region 47295	1256 bp downstream
Tssr47296	transcription start site region 47296	1246 bp downstream
Tssr47297	transcription start site region 47297	1226 bp downstream