rs33452499 SNP Detail

Summary

• ID
  rs33452499
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147784789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATCCAGAGT CCCGAGCTCA GTAGCACAAA GGTGCTCAGC
  TCCAGCCAGG AGAGTGAGTG ACCCCAGTGT TATTTCATTT TCTAATGTCG GTCCCCTCCG
  M
  TACGGACTTT GCACTTAGCT AGCCCAGCTT GATGATGCCA AGAGGACAGG AAGGGCTTTC
  CTTTCTGGTC AAATACTGTG ACCCACTAAA TCCTAGACT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45280593	mCV24540199	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	A
ss147906922	ENSMUSSNP3756150	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33452499					SNP	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147784789 () rs orientation: forward

Symbol	Name	Function Class
9030622O22Rik	RIKEN cDNA 9030622O22 gene	1594 bp downstream
Rr566828	regulatory region 566828	within coordinates
Rr566829	regulatory region 566829	1425 bp proximal