rs33454145 SNP Detail

Summary

• ID
  rs33454145
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119982125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGC AGATTTTCTC ACTACCCCAG
  K
  CTCTTCAGGC ATTCTACCTG GAAAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45280801	mCV23845022	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss147352683	ENSMUSSNP2314593	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss320478831	CHEV_2_119977380	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33454145					SNP	T	T	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119982125 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ehd4	EH-domain containing 4			Intron
				Noncoding-Transcript-Variant
Rr563647	regulatory region 563647			553 bp distal