rs33454240 SNP Detail

Summary

• ID
  rs33454240
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:92479030 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGT GGAACTTGCC TAAAATTCAG
  K
  ATGTGCATGT GTGAAATCGT CCAAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45780728	mCV23365543	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss148831547	ENSMUSSNP1169192	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
ss321612286	CHEV_5_92760197	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33454240					SNP	G	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:92479030 () rs orientation: forward

Symbol	Name	Function Class
Art3	ADP-ribosyltransferase 3	656 bp upstream
Rr125466	regulatory region 125466	970 bp proximal
Tssr47295	transcription start site region 47295	622 bp upstream
Tssr47296	transcription start site region 47296	647 bp upstream
Tssr47297	transcription start site region 47297	657 bp upstream