rs33455500 SNP Detail

Summary

• ID
  rs33455500
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:14237734 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTCAGATCT TCCTTCCTGA
  TGGGGTTCAT TCATTCATTC ATTCAAGCAA AACAAGCCTT TGGAGCAAGC CAGTTAGCTG
  CACTGTTCCA TGGCTCTGGT TCTGCTTCTG ATTCCAAGTT CCTGCTGGGG TTTTACCAGT
  CCTCCCTCAA TGATGTCTTG TGATGGGAAA ATTCAAATGT AAATGTTAAG TCAAATCAAC
  M
  TTTCCTCCAC CCATTGGTCT TTATCATGGT ATTTATCACA ATAATAAAAA GTTAACTAGG
  ACAGTACCTC TCATTTTTAC AAATAGAAAA GCAAACATAT AAACCCAAAT ATATCCAATG
  CTTTTGCTGA TTGCTAAATA TGTGATAGAG GAAAAGCTTA TTGGAAAATA TTTGAATGAT
  AAAATATATA AGTGGTCATC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47800014	NES11703335	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33455500					SNP	C	C	C	C	A	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47800014	NES11703335	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:14237734 () rs orientation: forward

Symbol	Name	Function Class
Gm67285	predicted gene, 67285	within coordinates
Rr378968	regulatory region 378968	within coordinates