rs33455502 SNP Detail

Summary

• ID
  rs33455502
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:14237946 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTGGTCTT TATCATGGTA
  TTTATCACAA TAATAAAAAG TTAACTAGGA CAGTACCTCT CATTTTTACA AATAGAAAAG
  CAAACATATA AACCCAAATA TATCCAATGC TTTTGCTGAT TGCTAAATAT GTGATAGAGG
  AAAAGCTTAT TGGAAAATAT TTGAATGATA AAATATATAA GTGGTCATCA TTTTCCATTA
  W
  TTCTACTACA TACATAATAA TAATATAGTA CAACTGTGCA ATTGTCTATT TTTGTTCATG
  AAAGGTAAAA ATAAATTTAA GAAGTTTTAG TTTGTTTTAT TATGGTACAT TTAGGTTTTG
  CATCTTTCTA TTATTCTATT TTTAATCTTG TTATACTGGT TTTCCTCATG TAACATCAGT
  CATATCAGAA AGTACAGGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47800016	NES11703336	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	A	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33455502					SNP	T	T	T	T	T	T	T	T	A	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47800016	NES11703336	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:14237946 () rs orientation: forward

Symbol	Name	Function Class
Gm67285	predicted gene, 67285	within coordinates
Rr378968	regulatory region 378968	163 bp downstream