rs33455523 SNP Detail

Summary

• ID
  rs33455523
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:30340716 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGG TGGCTCACAC ATTTTTTTTT
  W
  AAAAATTCCA AGAGCATCCA GTGCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45281101	mCV25441976	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	A
ss146398976	ENSMUSSNP5498203	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A	A
ss320221090	CHEV_2_30306224	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33455523					SNP	T	T	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:30340716 () rs orientation: forward

Symbol	Name	Function Class
Rr554329	regulatory region 554329	18 bp proximal