rs33460899 SNP Detail

Summary

• ID
  rs33460899
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:102297361 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACAGGGTTC TTTGAGAGGA GAGCTGTTTT CAGTGTGTGC
  TCGGAGTGCC GTAGTACCTG CATCTTGTTA GCCATAAGCC GTGGCCTCTT CTACCAGTAT
  K
  CCACCTGTGC AGTATGTTAC TGAAATTTGT GTAGAAATAA GGGAAGGGAT GTTGTCCATC
  AATCTGCACA GCCTGAGCTG TGACCCTTGT GTGCCCTCTG                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
ss46816103	NES10728177	PERLEGEN	MM_PANEL2	f	SNP	T	T	G	G	G
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ
rs33460899					SNP	T	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46816103	NES10728177	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:102297361 () rs orientation: forward

Symbol	Name	Function Class
Gm43245	predicted gene 43245	38 bp upstream