rs33463183 SNP Detail

Summary

• ID
  rs33463183
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31342318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAG AGTTCCTGTT TTGTATCTTG
  Y
  CGAATGTATC TTATTTCTGA TGTGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39538619	mCV22897723	ABI	CRAMUS_MOUSE	f	SNP		T	C					C	T
ss60562276	NES16490810	PERLEGEN	MM_PANEL2	f	SNP	T		C	C	T	C	C		T	T	T		T	T	T	T		C
ss145456766	ENSMUSSNP1574032	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C						T
ss325358769	CHEV_17_31260289	CHEVERUD	SCREENING_POP	f	SNP												T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33463183					SNP	T	T	C	C	T	C	C	C	T	T	T	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60562276	NES16490810	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31342318 () rs orientation: forward

Symbol	Name	Function Class
Rr330604	regulatory region 330604	718 bp distal
Rr334775	regulatory region 334775	1883 bp proximal
Rr341219	regulatory region 341219	918 bp distal
Tff3	trefoil factor 3, intestinal	1962 bp downstream