rs33467423 SNP Detail

Summary

• ID
  rs33467423
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28725446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCC AGGCCTTTGT GGGTCCCCCC
  S
  ACCCCGACTC TCCTGTTTCC CCAGT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39539750	mCV24973003	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G	C
ss145423052	ENSMUSSNP3198006	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss325352406	CHEV_17_28643417	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33467423					SNP	C	C	C	G	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28725446 () rs orientation: forward

Symbol	Name	Function Class
Gm65054	predicted gene, 65054	within coordinates
Tssr143433	transcription start site region 143433	720 bp downstream
Tssr147126	transcription start site region 147126	926 bp downstream
Tssr147127	transcription start site region 147127	1002 bp downstream
Tssr147128	transcription start site region 147128	1042 bp downstream
Tssr147129	transcription start site region 147129	1064 bp downstream