rs33468657 SNP Detail

Summary

• ID
  rs33468657
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:38706731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCCT AGTCAAACGC CATGGGGCTT
  R
  AAGAGGGAGG AGGAAAGCGT GAGTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45782903	mCV22716742	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss148266849	ENSMUSSNP3589758	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss321518837	CHEV_5_38940627	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33468657					SNP	G	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:38706731 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr610560	regulatory region 610560			1580 bp distal
Rr610561	regulatory region 610561			within coordinates
Wdr1	WD repeat domain 1			Intron
				Noncoding-Transcript-Variant