rs33470519 SNP Detail

Summary

• ID
  rs33470519
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:61966011 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTT ATGTTATTCT TTCATCTACT
  R
  AAGGACATTT ATTGAAGGAA AATCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45782837	mCV23377800	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss148545843	ENSMUSSNP6725852	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss321556040	CHEV_5_62199907	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33470519					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:61966011 () rs orientation: forward

Symbol	Name	Function Class
G6pd2	glucose-6-phosphate dehydrogenase 2	175 bp upstream
Gm73520	predicted gene, 73520	1478 bp downstream
Tssr46354	transcription start site region 46354	1953 bp downstream
Tssr46355	transcription start site region 46355	1932 bp downstream
Tssr46356	transcription start site region 46356	1918 bp downstream