rs33470632 SNP Detail

Summary

• ID
  rs33470632
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:84445102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGA GAATGAACAA GAGGGCTAGA
  M
  GTGGGTCCTA GTATGTTAGC ATCCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss46279775	mCV23003967	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	C
ss145360712	ENSMUSSNP2930577	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C		A
ss322745612	CHEV_8_86242372	CHEVERUD	SCREENING_POP	f	SNP					C		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs33470632					SNP	A	C	A	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84445102 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ddx39a	DEAD box helicase 39a			Intron
				Noncoding-Transcript-Variant
Rr666294	regulatory region 666294			1352 bp distal