rs33470650 SNP Detail

Summary

• ID
  rs33470650
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:120440465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCACTGATG TTCACTGACT
  CCCAAATGAA GACCTTGACA GAAGTCAGCA GCTGAGGGTG ATGGGGTGGT GTTCCACTCT
  GACATCAGTG CTCCTCACTG TGGTGCCTCA GCAGCTGAGT TCAGGAGGCT CTGTGGTCAC
  AGCATTCTGC ATCTAGTCTG AGGGGTTTCC CTCTGTCCAT TCTGTGGTTG ATGGTGTCCT
  Y
  TTGTGTCTGG AGCTGAGGGC TTTGAGTGCC TTTTGAAAGG TCTAAGGCAG TGGTTCTCGA
  CCTTCCTAAT GCCACGACCC TTTAACGTGG CTCCTCGTGT TGTGGTGATC GCAGCCATAA
  AATTATTCTG TTGCTACTTC AGTAATTTTG TTATGAATTA TAATGCAAAT ATGTGTATTT
  TCCCATAGCC CTTAGGTAAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47802541	NES11986347	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33470650					SNP	T	T	T	T	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47802541	NES11986347	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:120440465 () rs orientation: forward

Symbol	Name	Function Class
Gm39456	predicted gene, 39456	523 bp downstream