rs33471382 SNP Detail

Summary

• ID
  rs33471382
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118595195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGA AGCATTCCAA AAGCTTGGCT
  R
  GCAATTGGAG TGGGGGTGGG GTTTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45282566	mCV22541340	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss147312044	ENSMUSSNP4014560	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss320471663	CHEV_2_118590450	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33471382					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118595195 () rs orientation: forward

Symbol	Name	Function Class
Rr367276	regulatory region 367276	1927 bp downstream
Rr397216	regulatory region 397216	within coordinates
Rr563326	regulatory region 563326	1563 bp distal
Rr563327	regulatory region 563327	within coordinates
Rr563328	regulatory region 563328	18 bp distal
Rr563329	regulatory region 563329	592 bp proximal
Rr563330	regulatory region 563330	1777 bp proximal