rs33473038 SNP Detail

Summary

• ID
  rs33473038
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127903572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTATTAAT AACCCCAAGT TGGAAACTGG AAACTGAATG
  TTTATAGATA TGAAACTAGA CAAGTAAACT GTGGTTGGCT TCACATAGTG AATCATGTGA
  Y
  GCAGCATGTG TGAGTTCTAC TGACATGCTT AGTGATGTGA AAGCGTGTAT ACCAGATACC
  CCATGTATTC GACGGTCGAG GAGGAGGAAA GCCAGCTGA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45282755	mCV23907264	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs33473038					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127903572 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	within coordinates
Rr397293	regulatory region 397293	361 bp downstream
Rr397294	regulatory region 397294	within coordinates
Rr564634	regulatory region 564634	within coordinates
Tssr20040	transcription start site region 20040	1448 bp upstream
Tssr20041	transcription start site region 20041	1469 bp upstream