rs33473602 SNP Detail

Summary

• ID
  rs33473602
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165467116 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCCAGCCC TGAAACTGCT
  CAGCAATACA AGACCAGTGA CAGCAGCTGC CCCTGCTGGG TCCTGCACCC TATAGGAGCT
  TTTACATCTG TTTTCTGTAG AGAGTCCCAG GTTCGTGAGG GGACACCAAT GAGCTCTGGG
  AGACTTAGAG ATATAAGTCA GGTGCAGGCC CATGTCCACG ATATGCGCAT GTCTCCCACA
  S
  GGGTGAGATC TCTGTGAGGT CTGAGGTGCA AGGAGAGGGC GCTACAGAAA AGACTAGAAG
  GCGCTAGAAA AAAATGAGAA CAAAATAAGA GATCATGGTG TTGCTTTTGA TTGTGTTCTT
  ACATTTCTAT TCTTGTTTAT TTTGAGACAG AGATTTAACT GTATGGCCCG GACTGACCTT
  GAATGCTCAG CTCTCCCGCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45282475	mCV23022147	ABI	CRAMUS_MOUSE	f	SNP	C		G	G	G
ss148241856	ENSMUSSNP6371371	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G		G
ss320608491	CHEV_2_165450696	CHEVERUD	SCREENING_POP	f	SNP						G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33473602					SNP	C	C	G	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165467116 () rs orientation: forward

Symbol	Name	Function Class
Eya2	EYA transcriptional coactivator and phosphatase 2	Intron
Rr569965	regulatory region 569965	1689 bp proximal