rs33474643 SNP Detail

Summary

• ID
  rs33474643
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:105912012 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGA AATGAATCGT GAACTAACTT
  S
  TCCTCAAGAG AACTTAATTC CATTA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss45282942	mCV23755360	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	C
ss147171307	ENSMUSSNP6668902	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C		C		C
ss320448478	CHEV_2_105921824	CHEVERUD	SCREENING_POP	f	SNP					G		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs33474643					SNP	G	C	C	C	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:105912012 () rs orientation: forward

Symbol	Name	Function Class
Dcdc5	doublecortin domain containing 5	within coordinates
Gm74997	predicted gene, 74997	within coordinates
Gm75005	predicted gene, 75005	within coordinates
Rr707	regulatory region 707	1727 bp proximal
Tssr19274	transcription start site region 19274	737 bp downstream
Tssr19275	transcription start site region 19275	663 bp downstream
Tssr19276	transcription start site region 19276	632 bp downstream