rs33477380 SNP Detail

Summary

• ID
  rs33477380
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:73568141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAG TGATAGCAGC TCCTTGAAGG
  Y
  GGTGGCAGGA ATGGTCCAGG TAGAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss39541067	mCV23080929	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss325448740	CHEV_17_73610486	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs33477380					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:73568141 () rs orientation: forward

Symbol	Name	Function Class
Gm65147	predicted gene, 65147	within coordinates
Gm65808	predicted gene, 65808	1932 bp upstream
Rr370312	regulatory region 370312	1944 bp upstream
Rr530757	regulatory region 530757	1980 bp distal
Rr530758	regulatory region 530758	1499 bp proximal