rs33483100 SNP Detail

Summary

• ID
  rs33483100
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:49346086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTC TGTCCTGTAG AGGGGACAGC
  R
  GGGCTCGTGG CTCACTGAAT AACTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39541936	mCV23750489	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss145726109	ENSMUSSNP7167517	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss325411087	CHEV_17_49178383	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33483100					SNP	G	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:49346086 () rs orientation: forward

Symbol	Name	Function Class
Lrfn2	leucine rich repeat and fibronectin type III domain containing 2	within coordinates
Rr337874	regulatory region 337874	1374 bp distal