rs33483452 SNP Detail

Summary

• ID
  rs33483452
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:57309988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGT TCTTCCATAG TTTAGACCAC
  Y
  AGCCAAGGAG TGTACCTGGA GGGAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39541219	mCV23457618	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33483452					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:57309988 () rs orientation: forward

Symbol	Name	Function Class
Gtf2f1	general transcription factor IIF, polypeptide 1	417 bp downstream
Rr529237	regulatory region 529237	1351 bp distal
Tssr148848	transcription start site region 148848	1430 bp downstream
Tssr148849	transcription start site region 148849	1702 bp downstream
Tssr148850	transcription start site region 148850	1822 bp downstream
Tssr148851	transcription start site region 148851	1876 bp downstream