rs33483961 SNP Detail

Summary

• ID
  rs33483961
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:142156608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATCT CACTGCCTAA TTGTGTAGTG
  R
  TGTTCATTAT TCTTTGATTC TTTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45784160	mCV24556830	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	G
ss144587949	ENSMUSSNP1251351	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss321708228	CHEV_5_142646807	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33483961					SNP	A	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:142156608 () rs orientation: forward

Symbol	Name	Function Class
Cpgi16942	CpG island 16942	1615 bp proximal
Sdk1	sidekick cell adhesion molecule 1	Intron