rs33485364 SNP Detail

Summary

• ID
  rs33485364
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:54437260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGTTCTCTG GTAGAATTTT TAGGGTCACT TATATATACT
  ATCATATCAT CTGCAAAAAG TGATATTTTG ACTTCCTCTT TTCCAATTTG TTTCCCCTTG
  M
  TCTCCTTTTG TTGTCGAATT GCTCTGGCTA ATACTTCAAG ATGTAGCTGT CTCTTGTGAG
  ACTATGCCGG GGCCTAGCAA ACACAGAAGT GGATGCTCA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss39541408	mCV24493851	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A
ss145029478	ENSMUSSNP2290817	ENSEMBL	ENSEMBL_Sanger	r	SNP		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs33485364					SNP	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss145777983	ENSMUSSNP2279316	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:54437260 () rs orientation: forward

Symbol	Name	Function Class
Rr392758	regulatory region 392758	1927 bp upstream