rs33485727 SNP Detail

Summary

• ID
  rs33485727
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:34790847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCAC ACTCCAGTAA ATAGCCCCAC
  M
  CTATACCCAC ACTAACTAAA TTCCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45784275	mCV22356673	ABI	CRAMUS_MOUSE	f	SNP	A	C	C
ss148219002	ENSMUSSNP2524177	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33485727					SNP	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:34790847 () rs orientation: forward

Symbol	Name	Function Class
Add1	adducin 1	1195 bp downstream
Mfsd10	major facilitator superfamily domain containing 10	141 bp downstream
Rr125078	regulatory region 125078	1953 bp proximal
Tssr50667	transcription start site region 50667	1203 bp downstream
Tssr50668	transcription start site region 50668	1354 bp downstream
Tssr50669	transcription start site region 50669	1382 bp downstream
Tssr50670	transcription start site region 50670	1450 bp downstream
Tssr50671	transcription start site region 50671	1508 bp downstream