rs33487530 SNP Detail

Summary

• ID
  rs33487530
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164712218 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTCC CCTTCAATAG AGGACCCGGA
  R
  ATGCCACTCT CTGGCATGTG CCCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45284451	mCV23740430	ABI	CRAMUS_MOUSE	f	SNP		A	G	A
ss148232499	ENSMUSSNP6970947	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss320606992	CHEV_2_164695798	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33487530					SNP	G	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164712218 () rs orientation: forward

Symbol	Name	Function Class
D2Mit227	DNA segment, Chr 2, Massachusetts Institute of Technology 227	714 bp distal
D2Mit342	DNA segment, Chr 2, Massachusetts Institute of Technology 342	722 bp distal
Gm75526	predicted gene, 75526	within coordinates
Rr40389	regulatory region 40389	1383 bp proximal
Rr47627	regulatory region 47627	218 bp distal
Rr374207	regulatory region 374207	1844 bp downstream