rs33487737 SNP Detail

Summary

• ID
  rs33487737
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131403690 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCATACGTC GCAGAAGGTC CGGCCGAAGG CCCAGAAGCC
  TAGAACCTCC ATAGTGGCTG AGAAGGGCAA CACAGCTGCA CTCAGTAGCA GGTCAGCCAC
  Y
  GCTAGGTTCA CGATGAAATA GTTGGTGACC GTCTGCAAGT GGCGGTTGCA GGCCACGGAG
  AGGATGACGA GAAGGTTGCC CGCCACAGCG GTGAGGATG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45284521	mCV22780878	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss147607896	ENSMUSSNP1636429	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33487737					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131403690 () rs orientation: forward

Symbol	Name	Function Class
Adra1d	adrenergic receptor, alpha 1d	within coordinates
Cpgi12295	CpG island 12295	within coordinates
Gm14285	predicted gene 14285	6 bp upstream
Rr55657	regulatory region 55657	within coordinates
Tssr20277	transcription start site region 20277	151 bp downstream
Tssr20278	transcription start site region 20278	119 bp downstream
Tssr26401	transcription start site region 26401	718 bp downstream
Tssr26402	transcription start site region 26402	745 bp downstream
Tssr26403	transcription start site region 26403	985 bp downstream