rs33489023 SNP Detail

Summary

• ID
  rs33489023
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142327347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACAGCCCTCT CCAACCTGTC ACTGAAGTGT ATATTCTTCC
  CCCTTACTAA ATAAACTTCT GATGAATTTG TCAGGGTCTC TCATCTAAAT GCTTTTTTTT
  K
  TTTGTTTTAT GACAAGAACT TAGGAGAAAC TTTCACTAGA AACAAAATTA AAAGATGAAA
  TAAAAATTCT TTGAAAGAAA TTATCAAAAC TTAAGATTG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45284638	mCV22352586	ABI	CRAMUS_MOUSE	f	SNP	T	G
ss147732290	ENSMUSSNP740705	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss320531575	CHEV_2_142311163	CHEVERUD	SCREENING_POP	f	SNP			G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs33489023					SNP	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142327347 () rs orientation: forward

Symbol	Name	Function Class
Rr566216	regulatory region 566216	556 bp proximal