rs33489835 SNP Detail

Summary

• ID
  rs33489835
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:60023903 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCCGGCCAT AACATTAATC
  TTTTAAGGTC ATGTTGTGGA GTAGAATTCC TCACCATCAC TCAGCTCCGT ATTTATTTGT
  GGAAGTCCTA ACATCAAGAC CGCAGAACAT GGCTGAATCA AAGGGAAGGC CTTAAAGGAA
  GTGGTAAGAT AGAAGGTCGG TATATGGGTG CCTTATCTAT TAAGAGTATT TTCCTTCTAG
  K
  AGTCTGTGAA GATGCAGGCA AGACACAGAG TGAAGGGTAA CCATACAAGC ACACAGTAAG
  AAGGAAACAA GGAACTGTCT TAGAATGAAA TCAACTCTTA AGACATGTTG ATCTTGGACT
  TCTAGCTACC AGGTCAGCTT ATAGTCTTTG AAAAAGCATT CCAAATCCAC ATGAACACAT
  ATAACATAAT TTGTGGACTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45285086	mCV22300541	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T	T
ss146647632	ENSMUSSNP3621114	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33489835					SNP	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:60023903 () rs orientation: forward

Symbol	Name	Function Class
Baz2b	bromodomain adjacent to zinc finger domain, 2B	within coordinates
Rr373232	regulatory region 373232	1948 bp upstream