rs33491311 SNP Detail

Summary

• ID
  rs33491311
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153361887 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACAGCACCTA CTCTAACCAT CCTAGCAATT TTCCCACCTA CCCACAGGGT ACAGACTTTG
  TCAGTACAAA AGGCCAGGAT CAGAGCAGAC ACCTGTGACA CAGACAGTCA CACAGTCACT
  AGTGGGGTTG TAAAGTCAGG TCTGCCATTG GTCCTGTCAT CCTCTGGTCT TCCCTATAGC
  TTCTCTGGCC TAATCGTGAG CACCGTGAGC CTGTGCAGAT CCCTTCACAC CCCCATGAGA
  ATGTCAACCT CTCAACTTAA CTCAATTTTC TCCTCAACCC TAAGGAACCG CCATTAGACT
  M
  ATTTTTCTGA TGAAGAAACA GAAGTTGCTA CCTAGCTGGG TGCTCAGCAC TGGCTGTGCC
  TTGGTTTGCT AACCTGCAGA ATGGGGTCAT AACAGCCTCT CAAGGTGGCT AACAACTGCA
  CAAGACTGGG GAAGCTCGGG CCCATGGACA GACCCCAGAT GAGGCCCTGG ATCTAGTGCG
  TTCTTGTCCA CCCCTCACAC CCTACAGGCC TGGCCTGATG AGGAAAGGCG CCATGTCTGT
  TGGAACATTT GCTGGGCCCT CAGATGCTGA GAAACGCTGA GTCATCCACC CTAGTGAGCG
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45285037	mCV22913995	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss147995296	ENSMUSSNP5238677	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33491311					SNP	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153361887 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nol4l	nucleolar protein 4-like			Intron
				Noncoding-Transcript-Variant
Rr567668	regulatory region 567668			within coordinates