rs33500355 SNP Detail

Summary

• ID
  rs33500355
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118094243 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAG TAGTCTCATT TTTATTCCAA
  R
  TAAGATGCCT TTTGATAGAG TATCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45286130	mCV23826948	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss147293636	ENSMUSSNP1179884	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss320468259	CHEV_2_118089498	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33500355					SNP	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118094243 () rs orientation: forward

Symbol	Name	Function Class
Gm29232	predicted gene 29232	within coordinates
Gm75384	predicted gene, 75384	within coordinates
Rr397203	regulatory region 397203	193 bp downstream
Rr563206	regulatory region 563206	121 bp distal
Rr563207	regulatory region 563207	424 bp distal
Rr563208	regulatory region 563208	within coordinates
Rr563209	regulatory region 563209	66 bp proximal