rs33500599 SNP Detail

Summary

• ID
  rs33500599
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:93306652 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCC AAATCTCTAC TGTCCTTATA
  Y
  ACCCCAGCCT CCCCTTACAC ACACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45286221	mCV22699576	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss146944165	ENSMUSSNP6531911	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T	C
ss320396017	CHEV_2_93316464	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33500599					SNP	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93306652 () rs orientation: forward

Symbol	Name	Function Class
Rr561215	regulatory region 561215	615 bp distal
Rr561216	regulatory region 561216	1100 bp distal
Rr561217	regulatory region 561217	274 bp proximal
Rr561218	regulatory region 561218	1178 bp proximal
Rr561219	regulatory region 561219	1433 bp proximal