rs33503479 SNP Detail

Summary

• ID
  rs33503479
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85438390 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAC ACGGAGGATG GGGAGGGGGG
  M
  ATACCAAGGT CTGAGCTGGC TCCTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46283683	mCV24193953	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss145392448	ENSMUSSNP929717	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss322751423	CHEV_8_87235660	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33503479					SNP	C	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85438390 () rs orientation: forward

Symbol	Name	Function Class
Nfix	nuclear factor I/X	within coordinates
Rr178192	regulatory region 178192	1790 bp distal
Rr178193	regulatory region 178193	190 bp distal
Rr178194	regulatory region 178194	811 bp proximal
Rr187003	regulatory region 187003	10 bp proximal