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rs33505013 SNP Detail
Summary
  • ID
    rs33505013
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr17:3619265 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CTCTTAATGT AATTTTACTA
    TAAAATAGAG TGACTTATTG TCCGCTCTCT CATATGCTCT GCCTATGGGG GGCGTCTCAT
    GATAATATTC TTTTCTGGCA TGTTAATCTT CTTTTCCTGT TGTAGGAGAA AGCCCTAACA
    CACCCCCTTC CCTGTCTAAG GAAGCCTGGA TAGAAATGGC CTGGGAACTT ATACAACTAA
    R
    GTTTCCTTTA AGAAAGATAA TTCAAAATTA CAAATACTAG GTTAAGTGTC AAAGCCAATA
    TTTATTTGGA ATAAGACAAG AAATCACATG AAATAATAAA TATCCAATAG CAAAATCACA
    ATATAACATC TCCAAATAAC AGCCAAATTT TTTTATGATA AATTTCTTTC AGGTTTTGAT
    ATTGATATTA TATTTATAAT                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
LG/J
SM/J
ss39543898 mCV22963878 ABI CRAMUS_MOUSE f SNP G A G
ss145044557 ENSMUSSNP5546985 ENSEMBL ENSEMBL_Sanger f SNP A
ss325286857 CHEV_17_3568990 CHEVERUD SCREENING_POP f SNP A A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
LG/J
SM/J
rs33505013 SNP G A G A A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr17:3619265 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm34155 predicted gene, 34155 within coordinates
Gm65020 predicted gene, 65020 within coordinates
Rr331141 regulatory region 331141 1936 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory