rs33508604 SNP Detail

Summary

• ID
  rs33508604
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:84659231 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATAATTCAA AGGGAGAAGG GGATATAATA ACGTAGGATT
  TTTGTCTAGA ATGCAGGATG CCCTTGGTTT GATCTTGACA TGGTGCCTAT AATTTCAGCA
  S
  TTAGAGGCCA GAGACTAAAT AGTTCAGGAT CATTCTTGGC TATATAGTGG GTTCAAAACC
  AGCCTGGGAT AGATGAGACC AGTCTCAAAA GAAAGAAAG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45287485	mCV23821591	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G	C
ss146834945	ENSMUSSNP4018163	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33508604					SNP	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:84659231 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11868	CpG island 11868	1737 bp distal
Cpgi11869	CpG island 11869	1044 bp distal
Rr397100	regulatory region 397100	1771 bp downstream
Timm10	translocase of inner mitochondrial membrane 10	within coordinates
Tssr18699	transcription start site region 18699	1820 bp downstream
Tssr18700	transcription start site region 18700	1789 bp downstream