rs33514522 SNP Detail

Summary

• ID
  rs33514522
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84498354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACGTAGCATG GTAAGCTGGG CCACATGATG CGGCTCAGTG
  GATAAACGTG CGTGCTCTGC AAGCCTGAGC CTGAGTCGAT CTCTGAAGCC CATGCAGAGG
  Y
  GGGAGGAGAG AGCTGGCTCT ATAAAGTTGT CCCTCAACTT CCTCAGACAT CCATGCTGGG
  GCATGGGTGC CCTCCTATCA TGTACAGGTG CTGATAATA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J	DBA/2J
ss39545261	mCV23110616	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss146132124	ENSMUSSNP1616213	ENSEMBL	ENSEMBL_Sanger	f	SNP			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J	DBA/2J
rs33514522					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84498354 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9566	CpG island 9566	1904 bp distal
Gm36279	predicted gene, 36279	within coordinates
Gm56881	predicted gene, 56881	1512 bp downstream
Rr333589	regulatory region 333589	954 bp distal
Rr333590	regulatory region 333590	within coordinates
Rr340271	regulatory region 340271	1553 bp distal
Thada	thyroid adenoma associated	within coordinates