rs33514618 SNP Detail

Summary

• ID
  rs33514618
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:71150787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGG GACTGAAGTT AAGTTCATGA
  M
  TAGCGGAGTC TAGAGGATGA GATCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46285337	mCV22788483	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	C
ss145129769	ENSMUSSNP6158985	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		C
ss322701105	CHEV_8_73222036	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33514618					SNP	C	A	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:71150787 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20486	CpG island 20486	1126 bp distal
Gm11175	predicted gene 11175	1024 bp downstream
Gm64347	predicted gene, 64347	within coordinates
Gm64349	predicted gene, 64349	356 bp upstream
Jund	jun D proto-oncogene	812 bp upstream
Rr368549	regulatory region 368549	159 bp upstream
Rr368550	regulatory region 368550	522 bp upstream
Rr664888	regulatory region 664888	1135 bp distal
Rr664889	regulatory region 664889	within coordinates
Rr664890	regulatory region 664890	367 bp proximal
Rr664891	regulatory region 664891	521 bp proximal
Rr664892	regulatory region 664892	666 bp proximal
Rr664893	regulatory region 664893	1541 bp proximal
Tssr77799	transcription start site region 77799	389 bp upstream
Tssr77800	transcription start site region 77800	794 bp upstream
Tssr81647	transcription start site region 81647	180 bp downstream
Tssr81648	transcription start site region 81648	197 bp downstream