rs33519528 SNP Detail

Summary

• ID
  rs33519528
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:154301878 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTCCCTCA AAATGTGAGT
  CTGTGTGTAC ATTTATTCCA CTAGTGATTT GAATAGATGG GTTTTACACA ATATTTTAGC
  TGTTATTGTC AGTCATAAAC AAATTACATG TATTTAACAA GTTAATGTCA GATTGGCCAG
  GAGCCACTAG GAGGTGTGTA CCTAGTGACA TCAGCTGGCA AAGCGCCCGC CCTGGTAACC
  R
  GAGTGTGGAA GGGTAGTGGA GAGAGAGGAA AAGGGAGGGA GGGAGGGAGG GAGAGAGGGA
  GAGGGAGAGA GAGAGGGAGA GAGAGACTGA GAGACTGAGA GACTGAGAGA CTGAGACTGA
  CTGTATCTGG GGATTCTGGC AAGGTGAAGA GCTGGTCTGT TTGGCAGGAC CTTCCCATCT
  GGGATCCATC TGTGTTTCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45288528	mCV22917613	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss148031036	ENSMUSSNP3554614	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33519528					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:154301878 () rs orientation: forward

Symbol	Name	Function Class
Cbfa2t2	CBFA2/RUNX1 translocation partner 2	Intron
Rr567835	regulatory region 567835	within coordinates