rs33519972 SNP Detail

Summary

• ID
  rs33519972
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28044307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTA TGGAATACAA TGTGGAGAGG
  R
  GGTACCCACG ACAAGGTGTG CCCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39546153	mCV23708307	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss325349852	CHEV_17_27962278	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33519972					SNP	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28044307 () rs orientation: forward

Symbol	Name	Function Class
Gm65125	predicted gene, 65125	888 bp downstream
Rr405125	regulatory region 405125	869 bp upstream
Rr405126	regulatory region 405126	1924 bp upstream
Tssr143360	transcription start site region 143360	84 bp downstream
Tssr143361	transcription start site region 143361	33 bp downstream
Tssr147072	transcription start site region 147072	704 bp downstream
Tssr147073	transcription start site region 147073	1591 bp downstream