rs33521538 SNP Detail

Summary

• ID
  rs33521538
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:4468115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTAGCTCCC GCTGCCCTTG
  AACTCATTGT ATAGCCTAGA ATGACTTCTT GATACCACCT CTTGGAGTGC TCCATGACAG
  GCATGGGGCA CCATTTCCAG CTTTCTTTTT CTGTTATTTA TTTTCATAAT GCTACTCTTC
  ACATTATTAT CAATCTATGG CATTCTAGTA AAAATTTTAA AGTTACCTTA CAGTCTGTCT
  R
  TCTCTGTTTC TGCTTCCCAC TCTGTGTGTG TGTGTGTTGT GATGTTATGT TTGTGACACA
  GTGCACATGT CAATCTCAAA CTGCTAGGTT TGGCAGCAAA CTACTGCCAT CTCACAATCT
  CTCTCTCTGT CTCTCTCTCT CTCTCTGTCT CTCTCTCTCT CTCTCTCTGT GTGTGTGTGT
  GAGCATGGGG GAGTTATGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46286429	mCV25172361	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33521538					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:4468115 () rs orientation: forward

Symbol	Name	Function Class
Tssr2482	transcription start site region 2482	1240 bp upstream