rs33522247 SNP Detail

Summary

• ID
  rs33522247
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103475111 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCTGTGA TTGTCTCAGG
  GTTTTTAATC TTGCTCCATT CCCCTCTCCC GGGGATCTGA GTTTCCCAAA AGCTGGATAG
  CCATCCCTAG GAAGAACTTC AGAGTATCTG TCAGGTATGT CCAGGAATGT GACTGAAAAA
  TCATGTGTGT GTGCTTGTGT TAGAGGGAAG AATTACTCAG AAAGAAACAA AATCAATTCC
  Y
  GTCAAGCTCA GCGGCTGTTC TTAGGAACAA ACACGGCATC ATCACTCTGC CATAGCACAG
  CTACCTGGCC TTGACTCTAG CTGTCTCTTC CATGCTGAGG CAGAGTCCCA GTTACTACAC
  TAACCAGGAT CTCTTGGGTG GTGGATCACT GCTGAGACCT CTTAAGATGC TACTGTTGCT
  CATGTCCAAG GCTACATGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46824326	NES10726867	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33522247					SNP	T	T	T	T	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46824326	NES10726867	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103475111 () rs orientation: forward

Symbol	Name	Function Class
Rr69865	regulatory region 69865	within coordinates