rs33525208 SNP Detail

Summary

• ID
  rs33525208
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25672932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAC ACGCAGCCTT TGGCTTCAGG
  R
  CCAGGGGCCT TGCCAGGCAG GCTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39546844	mCV25396130	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss145389364	ENSMUSSNP2044343	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss325337984	CHEV_17_25590903	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33525208					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25672932 () rs orientation: forward

Symbol	Name	Function Class
Gm63608	predicted gene, 63608	within coordinates
Rr523576	regulatory region 523576	1922 bp distal
Tekt4	tektin 4	583 bp upstream
Tssr143159	transcription start site region 143159	216 bp downstream
Tssr143160	transcription start site region 143160	569 bp upstream