rs33525497 SNP Detail

Summary

• ID
  rs33525497
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127739579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAGCTCTA AAAGAGGGTT
  TCTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTTTTTTTT TTTGGTTTTT CGAGACAGGG
  TTTCTCTGTA TAGTCTTGGC TGTCCTGGAA CTCACTTTGT AGACCAGGCT GGCCTCGAAC
  TCAGAAATCC ACCTGCCTCT TAAAAGAGGG TTTCTTGGGT TTCTAGAAAC ATAAATGCTT
  R
  ACTGGAGCTG AACCATGAAA TATTTCAAAA ATTTCCTCCT GTCCATCTCC TTGATTGTGT
  TGCCTGCGTC TTGAATTTGA TTTTTGTTTT TAGGGAACTT CCAGGTCAGG TAGTCAGAGT
  CAAGGACATT GGCTCAATAA TGACCCGGTT GAGTCATGTT TGCTTTGTGA ACTTTCATCT
  GGTAATAAGG TTGGAGAGCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss45289146	mCV23903712	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss320501020	CHEV_2_127723395	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs33525497					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127739579 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	Intron
Rr564612	regulatory region 564612	116 bp proximal