rs33526284 SNP Detail

Summary

• ID
  rs33526284
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:119066707 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTG GATGCTGGGA ATTGAACTCT
  R
  GTCCTCCACA AGAGTAGCAA TTGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45288974	mCV24413883	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss147326816	ENSMUSSNP6926224	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss320474337	CHEV_2_119061962	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs33526284					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119066707 () rs orientation: forward

Symbol	Name	Function Class
9130007G19Rik	RIKEN cDNA 9130007G19 gene	within coordinates
Cpgi12109	CpG island 12109	540 bp proximal
Rr563445	regulatory region 563445	363 bp proximal
Rr563446	regulatory region 563446	829 bp proximal
Rr563447	regulatory region 563447	1039 bp proximal
Rr563448	regulatory region 563448	1153 bp proximal
Rr563449	regulatory region 563449	1395 bp proximal
Rr563450	regulatory region 563450	1851 bp proximal
Spint1	serine protease inhibitor, Kunitz type 1	1134 bp upstream
Tssr19609	transcription start site region 19609	979 bp upstream
Tssr19610	transcription start site region 19610	1125 bp upstream
Tssr19611	transcription start site region 19611	1164 bp upstream
Tssr19612	transcription start site region 19612	1227 bp upstream
Tssr19613	transcription start site region 19613	1256 bp upstream
Tssr19614	transcription start site region 19614	1285 bp upstream
Tssr19615	transcription start site region 19615	1305 bp upstream
Tssr19616	transcription start site region 19616	1408 bp upstream
Tssr19617	transcription start site region 19617	1420 bp upstream
Tssr19618	transcription start site region 19618	1452 bp upstream
Tssr19619	transcription start site region 19619	1499 bp upstream