rs33527166 SNP Detail

Summary

• ID
  rs33527166
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27722519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGTCTAAGA CCACGTATGT TAAAGGTGAG TGTGTATAGT
  ACATATATGT GTGTTTTCTA TTTTTTGGTG CTTGGGCTTG AACCAAAGCA TACTGAAGTG
  R
  CTTATGAATA ACAGCTAGGA CTCTAGTCAC AAGGCTCTGG GTCTCATCAA GTATTTCATA
  AACTGGACAG GGCAACACAG GTTCCAAGAT CCCAGCAAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46287087	mCV22300037	ABI	CRAMUS_MOUSE	f	SNP	A			A		G
ss51947188	NES14964908	PERLEGEN	MM_PANEL2	f	SNP		A	A		G	G	A	G	A	A	G
ss148886335	ENSMUSSNP6770233	ENSEMBL	ENSEMBL_Sanger	f	SNP	A					G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33527166					SNP	A	A	A	A	G	G	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51947188	NES14964908	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27722519 () rs orientation: forward

Symbol	Name	Function Class
Adrb3	adrenergic receptor, beta 3	1686 bp upstream
Gm45470	predicted gene 45470	within coordinates
Gm63998	predicted gene, 63998	890 bp downstream
Rr381848	regulatory region 381848	1415 bp upstream
Tssr80798	transcription start site region 80798	1644 bp upstream
Tssr80799	transcription start site region 80799	1933 bp downstream