rs33528178 SNP Detail

Summary

• ID
  rs33528178
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31222179 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGCCATGCT ATGGGGAAGA ATCCTAGCTC CCAGAAGTCC
  AGAGCATTGA GCTGAAGGAT GCTGTGACAG AAGTCCCAGG AAGCTGAGAA GGACTTTGAC
  Y
  CCGAGTAAAC CTGTCAAGTG GATGCAAAGA GAAAGGACCC GGAGCAAAAA GTTCCAGGAC
  AGTCAGGGCT ACACAAAGAA ACCCTGTCTC CAAAAACCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39546702	mCV25212722	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	T
ss145454033	ENSMUSSNP2269002	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33528178					SNP	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31222179 () rs orientation: forward

Symbol	Name	Function Class
Tssr143635	transcription start site region 143635	1263 bp downstream
Umodl1	uromodulin-like 1	within coordinates